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People

by Integrating Experimental Data into Biomolecular Simulations
Dr. Jakob Rosenbauer (2021), Multiscale Modeling of Tumor Development
Dr. Mehari Zerihun (2021), RNA Structure Prediction Guided by Co-Evolutionary Information – Method Development and Applications
Dr. Momin Ahmad (2020), 
[…]
Integrating Experimental Data into Biomolecular Simulations
Dr. Jakob Rosenbauer (2021), Multiscale Modeling of Tumor Development
Dr. Mehari Zerihun (2021), RNA Structure Prediction Guided by Co-Evolutionary Information – Method Development and Applications
Dr. Momin Ahmad (2020), High-Throughput
[…]

People
Head
Alexander Schug
PhD Students
Eric Behle (FZJ)
Eric continues Jakob's work on large-scale tissue simulations using cellular Potts models. His current focus lies in understanding emergent properties during tumor growth. As a member of the
https://www.scc.kit.edu/en/aboutus/9214.php
21.09.2021
 Scientific Computing Center (SCC) → About us → Organisation → Departments & Research Groups → Research Group Multiscale Biomolecular Simulation → People

News

joined our group as PhD students at Forschungszentrum Jülich. Welcome! Find more information about their projects here .
May '21
Mehari and Jakob successfully defended their PhD theses. Congratulations!
Jan '21
Marie and Alex got the article The trimeric major capsid
[…]

News
Jul '21
Marie successfully defended her PhD thesis. Congratulations!
Marie and Alex got the article Dynamic particle swarm optimization of biomolecular simulation parameters with flexible objective functions published in Nature Machine Intelligence.
Jun '21
Eric and Christian
https://www.scc.kit.edu/en/aboutus/8896.php
07.09.2021
 Scientific Computing Center (SCC) → About us → Organisation → Departments & Research Groups → Research Group Multiscale Biomolecular Simulation → Recent News

Software

backgrounds.
pydca can be obtained from GitHub  or from the Python Package Index under the MIT License.
See also Zerihun, M. B., Pucci, F., Peter, E. K., & Schug, A. (2020). pydca v1. 0: a comprehensive software for Direct Coupling
[…]

Software
Here you can find an overview of software packages developed in our group.
eSBMTools
eSBMTools is a Python 2.7 package that assists in the setup and evaluation of structure-based simulations of proteins and nucleic acids, both at
https://www.scc.kit.edu/en/aboutus/8900.php
08.09.2021
 Scientific Computing Center (SCC) → About us → Organisation → Departments & Research Groups → Research Group Multiscale Biomolecular Simulation → Software

WLAN at KIT - General information

WLAN at KIT - General information
Persons entitled to use the WLAN at KIT
KIT Staff / Students
KIT staff and students as well as guest and partner accounts (GuP) can authenticate themselves through their KIT user account in
[…]

WLAN at KIT - General information
Persons entitled to use the WLAN at KIT
KIT Staff / Students
KIT staff and students as well as guest and partner accounts (GuP) can authenticate themselves through their KIT user account
https://www.scc.kit.edu/en/services/7131.php
05.03.2024
 Scientific Computing Center (SCC) → Services → Working environment → Network access (internet, wifi, vpn) → Wireless LAN at KIT → General information

Neu in Version 16.7

publizieren.
Eigene Ordner im Asset-Manager anlegen
Eigene Ordner im (neuen) Asset-Manager dürfen nicht mit einem "." enden. Der Ordnername "staff-M.Sc." ist also nicht zulässig. "staff-M.Sc" funktioniert.

[…]

Neu in Version 16.7
Navigation-Manager
Änderungen gab es im Hilfsbaum des Navigation-Managers : für die Seitensortierung und die aus der Navigation abgehängten Seiten gibt es jetzt einen eigenen Tab. Achtung: derzeit werden auch abgehängte Seiten in der Seitensortierung angezeigt.
https://www.scc.kit.edu/wsm/16-7.php
13.04.2022
 Web Site Management → Aus der Entwicklung → Update auf Version 16.7

Taking out of Service on 31st March 2016: "Leihpool"

Due to expiring financing the SCC can not offer the service "Leihpool - equipment lending service for students and staff at KIT" any more.
Außerbetriebnahme: Leihpool
Due to
[…]

2016-03-15
Taking out of Service on 31st March 2016: "Leihpool"
Due to expiring financing the SCC can not offer the service "Leihpool - equipment lending service for students and
https://www.scc.kit.edu/en/aboutus/10456.php
25.01.2024
 Scientific Computing Center (SCC) → About us → News

Events

76131
Karlsruhe
Mail:webmaster∂kit edu
Targetgroup
Employees , Administrative Staff , Scientific Staff
Number of participants
20
Service-Menu

[…]

Events
 
Workshop
KIT-Internetauftritte: Einführung in das Redaktionssystem OpenText Website
Management
Tuesday, 23 January 2024, 9:00-13:00
KIT, Campus Süd
20.21 Kollegiengebäude am Zirkel
UG, Raum -108, Pool D
Zirkel 2
76131
https://www.scc.kit.edu/en/events/index.php/event/51588
05.03.2024
 Scientific Computing Center (SCC) → Events

Events

76131
Karlsruhe
Mail:webmaster∂kit edu
Targetgroup
Employees , Administrative Staff , Scientific Staff
Number of participants
20
Service-Menu

[…]

Events
 
Workshop
KIT Websites: Introduction to the OpenText Website Content Management System (German)
Tuesday, 20 February 2024, 9:00-13:00
KIT, Campus Süd
20.21 Kollegiengebäude am Zirkel
UG, Raum -101, Pool F
Zirkel
https://www.scc.kit.edu/en/events/index.php/event/51912
25.01.2024
 Scientific Computing Center (SCC) → Events

Events

76131
Karlsruhe
Mail:webmaster∂kit edu
Targetgroup
Employees , Administrative Staff , Scientific Staff
Number of participants
20
Online registration
Online
[…]

Events
 
Workshop
KIT Websites: Introduction to the OpenText Website Content Management System (German)
Tuesday, 09 April 2024, 9:00-13:00
KIT, Campus Süd
20.21 Kollegiengebäude am Zirkel
UG, Raum -101, Pool F
Zirkel
https://www.scc.kit.edu/en/events/index.php/event/52196
05.03.2024
 Scientific Computing Center (SCC) → Events

Dr. René Caspart

Dr.  René Caspart
Tel.: +49 721 608-25631
E-Mail: rene caspart∂kit edu
Raum: 294
Gebäude: 449
Campus Nord
SCC-SCS

https://www.scc.kit.edu/en/staff/12332.php
25.01.2024
 Scientific Computing Center (SCC) → About us → Organisation → Departments & Research Groups → Scientific Computing & Simulation

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